Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658211

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201000000000000000Sequence Read ArchiveSRP057196SRP057196_T341A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex)HumanBrainRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 85.2871
2 ENSG00000131711 MAP1B microtubule associated protein 1B 58.6379
3 ENSG00000176887 SOX11 SRY-box transcription factor 11 54.1024
4 ENSG00000229807 XIST X inactive specific transcript 48.2750
5 ENSG00000147862 NFIB nuclear factor I B 48.0551
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 47.8902
7 ENSG00000124766 SOX4 SRY-box transcription factor 4 47.4366
8 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 46.1585
9 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 42.1453
10 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 41.9529

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0895
58502 ENSG00000285742 novel transcript -0.0895
58501 ENSG00000285741 novel transcript -0.0895
58500 ENSG00000285740 novel transcript -0.0895
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.0895
58498 ENSG00000285738 Novel transcript -0.0895
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0895
58496 ENSG00000285736 Novel transcript -0.0895
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0895
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0895

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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