Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677538

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T66The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 88.3240
2 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 64.9518
3 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 61.0602
4 ENSG00000196230 TUBB tubulin beta class I 58.5939
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.7550
6 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 53.2208
7 ENSG00000168028 RPSA ribosomal protein SA 36.2599
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 34.5371
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.7627
10 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 31.8352

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.1114
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.1114
58501 ENSG00000285738 Novel transcript -0.1114
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1114
58499 ENSG00000285736 Novel transcript -0.1114
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1114
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1114
58496 ENSG00000285733 novel protein -0.1114
58495 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1114
58494 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1114

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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