Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677541

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T69The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 107.4579
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 70.3520
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 45.4190
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 42.4883
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 41.5259
6 ENSG00000196230 TUBB tubulin beta class I 37.7427
7 ENSG00000168028 RPSA ribosomal protein SA 37.6349
8 ENSG00000273149 novel transcript, antisense to TPT1 35.8180
9 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 35.0713
10 ENSG00000137154 RPS6 ribosomal protein S6 33.7003

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285733 novel protein -0.1120
58502 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1120
58501 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1120
58500 ENSG00000285730 novel transcript -0.1120
58499 ENSG00000285729 novel transcript -0.1120
58498 ENSG00000285728 novel transcript, antisense to PPIH -0.1120
58497 ENSG00000285727 novel transcript -0.1120
58496 ENSG00000285726 novel transcript -0.1120
58495 ENSG00000285725 novel transcript -0.1120
58494 ENSG00000285724 novel transcript -0.1120

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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