Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677569

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T97The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 86.8796
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.8324
3 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 74.5337
4 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 74.0725
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 51.5904
6 ENSG00000137154 RPS6 ribosomal protein S6 46.6520
7 ENSG00000184009 ACTG1 actin gamma 1 44.6056
8 ENSG00000122406 RPL5 ribosomal protein L5 43.0395
9 ENSG00000174444 RPL4 ribosomal protein L4 37.6112
10 ENSG00000273149 novel transcript, antisense to TPT1 36.0931

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1088
58502 ENSG00000285736 Novel transcript -0.1088
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1088
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1088
58499 ENSG00000285733 novel protein -0.1088
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1088
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1088
58496 ENSG00000285730 novel transcript -0.1088
58495 ENSG00000285729 novel transcript -0.1088
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.1088

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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