Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677586

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T114The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 111.4737
2 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 106.8158
3 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 64.6126
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 53.7168
5 ENSG00000137154 RPS6 ribosomal protein S6 46.2175
6 ENSG00000168028 RPSA ribosomal protein SA 45.1622
7 ENSG00000174444 RPL4 ribosomal protein L4 38.5513
8 ENSG00000122406 RPL5 ribosomal protein L5 34.8001
9 ENSG00000148303 RPL7A ribosomal protein L7a 34.0814
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 33.7509

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0948
58502 ENSG00000285738 Novel transcript -0.0948
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0948
58500 ENSG00000285736 Novel transcript -0.0948
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0948
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0948
58497 ENSG00000285733 novel protein -0.0948
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0948
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0948
58494 ENSG00000285730 novel transcript -0.0948

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...