Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677624

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677624


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T152The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 151.0307
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 97.4002
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 62.6539
4 ENSG00000196230 TUBB tubulin beta class I 38.4987
5 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 36.2590
6 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 30.4879
7 ENSG00000137154 RPS6 ribosomal protein S6 29.4079
8 ENSG00000204628 RACK1 receptor for activated C kinase 1 28.2329
9 ENSG00000168028 RPSA ribosomal protein SA 25.6618
10 ENSG00000174444 RPL4 ribosomal protein L4 25.5575

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0766
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0766
58501 ENSG00000285742 novel transcript -0.0766
58500 ENSG00000285741 novel transcript -0.0766
58499 ENSG00000285740 novel transcript -0.0766
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0766
58497 ENSG00000285738 Novel transcript -0.0766
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0766
58495 ENSG00000285736 Novel transcript -0.0766
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0766

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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