Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677639

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677639


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T167The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 123.5267
2 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 78.4634
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 64.9683
4 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 50.5619
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 46.8909
6 ENSG00000184009 ACTG1 actin gamma 1 45.3201
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 44.1788
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 38.4467
9 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 35.8257
10 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 34.7322

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.1077
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1077
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1077
58500 ENSG00000285733 novel protein -0.1077
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1077
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1077
58497 ENSG00000285729 novel transcript -0.1077
58496 ENSG00000285728 novel transcript, antisense to PPIH -0.1077
58495 ENSG00000285727 novel transcript -0.1077
58494 ENSG00000285726 novel transcript -0.1077

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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