Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677655

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677655


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T183The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 121.3666
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.5287
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 60.9293
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 51.4909
5 ENSG00000184009 ACTG1 actin gamma 1 45.5124
6 ENSG00000168028 RPSA ribosomal protein SA 44.6206
7 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 37.4200
8 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 36.6603
9 ENSG00000198034 RPS4X ribosomal protein S4 X-linked 36.4786
10 ENSG00000142541 RPL13A ribosomal protein L13a 33.3986

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0777
58502 ENSG00000285741 novel transcript -0.0777
58501 ENSG00000285740 novel transcript -0.0777
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0777
58499 ENSG00000285738 Novel transcript -0.0777
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0777
58497 ENSG00000285736 Novel transcript -0.0777
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0777
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0777
58494 ENSG00000285733 novel protein -0.0777

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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