Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677666

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677666


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T194The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 89.3014
2 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 62.3577
3 ENSG00000198034 RPS4X ribosomal protein S4 X-linked 55.3920
4 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 49.0343
5 ENSG00000148303 RPL7A ribosomal protein L7a 47.0998
6 ENSG00000168028 RPSA ribosomal protein SA 46.8934
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 46.0365
8 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.2145
9 ENSG00000142541 RPL13A ribosomal protein L13a 39.7947
10 ENSG00000149273 RPS3 ribosomal protein S3 38.5786

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0821
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0821
58501 ENSG00000285742 novel transcript -0.0821
58500 ENSG00000285741 novel transcript -0.0821
58499 ENSG00000285740 novel transcript -0.0821
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0821
58497 ENSG00000285738 Novel transcript -0.0821
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0821
58495 ENSG00000285736 Novel transcript -0.0821
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0821

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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