Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677683

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677683


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T211The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 154.5186
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 114.0719
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 79.4338
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 51.0331
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 45.9262
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 45.2097
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.4951
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 28.1663
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 26.8148
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 16.4321

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285719 novel transcript, antisense to CD34 -0.0655
58502 ENSG00000285718 novel transcript -0.0655
58501 ENSG00000285717 novel transcript -0.0655
58500 ENSG00000285716 novel transcript -0.0655
58499 ENSG00000285715 novel transcript, antisense to TACC2 -0.0655
58498 ENSG00000285714 novel transcript -0.0655
58497 ENSG00000285713 novel transcript -0.0655
58496 ENSG00000285712 novel transcript -0.0655
58495 ENSG00000285709 Novel transcript -0.0655
58494 ENSG00000285708 novel protein -0.0655

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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