Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677702

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677702


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T230The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 101.7395
2 ENSG00000124486 USP9X ubiquitin specific peptidase 9 X-linked 33.4990
3 ENSG00000100664 EIF5 eukaryotic translation initiation factor 5 24.8435
4 ENSG00000101901 ALG13 ALG13 UDP-N-acetylglucosaminyltransferase subunit 24.3930
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 21.3189
6 ENSG00000198919 DZIP3 DAZ interacting zinc finger protein 3 21.0572
7 ENSG00000169398 PTK2 protein tyrosine kinase 2 20.1488
8 ENSG00000065618 COL17A1 collagen type XVII alpha 1 chain 19.8000
9 ENSG00000138646 HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 19.3639
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 17.1038

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.1925
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1925
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1925
58500 ENSG00000285733 novel protein -0.1925
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1925
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1925
58497 ENSG00000285730 novel transcript -0.1925
58496 ENSG00000285729 novel transcript -0.1925
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.1925
58494 ENSG00000285727 novel transcript -0.1925

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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