Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677748

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677748


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7100400010000000000000-875Sequence Read ArchiveSRP050499SRP050499_T276The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomeGonadal somatic cellHumanGenitaliaRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000248099 INSL3 insulin like 3 106.7776
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.6643
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 78.7520
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 77.4210
5 ENSG00000148795 CYP17A1 cytochrome P450 family 17 subfamily A member 1 64.9082
6 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 57.9195
7 ENSG00000166272 WBP1L WW domain binding protein 1 like 46.0450
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 36.7949
9 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 32.4682
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 31.2958

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0760
58502 ENSG00000285744 novel transcript -0.0760
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0760
58500 ENSG00000285742 novel transcript -0.0760
58499 ENSG00000285741 novel transcript -0.0760
58498 ENSG00000285740 novel transcript -0.0760
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0760
58496 ENSG00000285738 Novel transcript -0.0760
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0760
58494 ENSG00000285736 Novel transcript -0.0760

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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