Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677750

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677750


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7100400010000000000000-875Sequence Read ArchiveSRP050499SRP050499_T278The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomeGonadal somatic cellHumanGenitaliaRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 104.9593
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 99.3957
3 ENSG00000148795 CYP17A1 cytochrome P450 family 17 subfamily A member 1 79.9661
4 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 73.6503
5 ENSG00000166272 WBP1L WW domain binding protein 1 like 56.7872
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 53.8647
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 48.9556
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 47.9393
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 40.4637
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.4408

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0606
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0606
58501 ENSG00000285742 novel transcript -0.0606
58500 ENSG00000285741 novel transcript -0.0606
58499 ENSG00000285740 novel transcript -0.0606
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0606
58497 ENSG00000285738 Novel transcript -0.0606
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0606
58495 ENSG00000285736 Novel transcript -0.0606
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0606

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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