Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677754

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677754


Profile download
7100400010000000000000-875Sequence Read ArchiveSRP050499SRP050499_T282The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomeGonadal somatic cellHumanGenitaliaRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 116.6148
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 97.8561
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 94.3995
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 70.6960
5 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 53.5076
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 41.1730
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 35.5538
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.7672
9 ENSG00000196230 TUBB tubulin beta class I 28.3006
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.6589

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0774
58502 ENSG00000285741 novel transcript -0.0774
58501 ENSG00000285740 novel transcript -0.0774
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0774
58499 ENSG00000285738 Novel transcript -0.0774
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0774
58497 ENSG00000285736 Novel transcript -0.0774
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0774
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0774
58494 ENSG00000285733 novel protein -0.0774

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...