Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677763

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677763


Profile download
7100400010000000000000-875Sequence Read ArchiveSRP050499SRP050499_T291The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomeGonadal somatic cellHumanGenitaliaRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 92.1496
2 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 55.0440
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.4592
4 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 51.8744
5 ENSG00000168542 COL3A1 collagen type III alpha 1 chain 50.4120
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 40.1417
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 35.8044
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 29.0650
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.5572
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 25.1726

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.1169
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.1169
58501 ENSG00000285742 novel transcript -0.1169
58500 ENSG00000285741 novel transcript -0.1169
58499 ENSG00000285740 novel transcript -0.1169
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.1169
58497 ENSG00000285738 Novel transcript -0.1169
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1169
58495 ENSG00000285736 Novel transcript -0.1169
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1169

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...