Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677765

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677765


Profile download
7100400010000000000000-875Sequence Read ArchiveSRP050499SRP050499_T293The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomeGonadal somatic cellHumanGenitaliaRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 124.0836
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 112.3331
3 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 50.3235
4 ENSG00000184009 ACTG1 actin gamma 1 47.5462
5 ENSG00000112936 C7 complement C7 43.2047
6 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 40.5534
7 ENSG00000100316 RPL3 ribosomal protein L3 34.2842
8 ENSG00000168542 COL3A1 collagen type III alpha 1 chain 33.8037
9 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 30.5051
10 ENSG00000174444 RPL4 ribosomal protein L4 30.1184

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.0794
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.0794
58501 ENSG00000285738 Novel transcript -0.0794
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0794
58499 ENSG00000285736 Novel transcript -0.0794
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0794
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0794
58496 ENSG00000285733 novel protein -0.0794
58495 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0794
58494 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0794

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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