Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677766

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677766


Profile download
7100400010000000000000-875Sequence Read ArchiveSRP050499SRP050499_T294The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomeGonadal somatic cellHumanGenitaliaRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 166.0283
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 60.0549
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 56.7598
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 52.5406
5 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 37.9040
6 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 36.9929
7 ENSG00000184009 ACTG1 actin gamma 1 33.2635
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 29.1717
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 25.6350
10 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 25.5142

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285741 novel transcript -0.0852
58502 ENSG00000285740 novel transcript -0.0852
58501 ENSG00000285739 novel transcript, antisense to NRG3 -0.0852
58500 ENSG00000285738 Novel transcript -0.0852
58499 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0852
58498 ENSG00000285736 Novel transcript -0.0852
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0852
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0852
58495 ENSG00000285733 novel protein -0.0852
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0852

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...