SHOGoiN Cell Transcriptome: GSM2063484

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2063484


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3110001010000000000000Sequence Read ArchiveSRP070425SRP070425_T53Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cellsTranscriptomePancreatic islet cell (Pancreatic islet)MousePancreasRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000017316 Ppy pancreatic polypeptide 173.3918
2 ENSMUSG00000041681 Iapp islet amyloid polypeptide 100.4707
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 61.7166
4 ENSMUSG00000000215 Ins2 insulin II 48.5660
5 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 41.9591
6 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 38.1332
7 ENSMUSG00000017311 Pyy peptide YY 32.5854
8 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 31.2598
9 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 25.0702
10 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 20.0379

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117332 TEC -0.0352
54523 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.0352
54522 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0352
54521 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0352
54520 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0352
54519 ENSMUSG00000117327 NA -0.0352
54518 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0352
54517 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0352
54516 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0352
54515 ENSMUSG00000117323 novel transcript -0.0352

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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