SHOGoiN Cell Transcriptome: GSM2063618

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2063618


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3110001010000000000000Sequence Read ArchiveSRP070425SRP070425_T187Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cellsTranscriptomePancreatic islet cell (Pancreatic islet)MousePancreasRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 163.0330
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 120.2346
3 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 75.0562
4 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 58.7416
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 50.0566
6 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 28.2575
7 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 21.1188
8 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 17.6684
9 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 17.4422
10 ENSMUSG00000005232 G6pc2 glucose-6-phosphatase, catalytic, 2 5.8457

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117332 TEC -0.0105
54523 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.0105
54522 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0105
54521 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0105
54520 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0105
54519 ENSMUSG00000117327 NA -0.0105
54518 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0105
54517 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0105
54516 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0105
54515 ENSMUSG00000117323 novel transcript -0.0105

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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