Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM967509

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T2Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 113.5535
2 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 70.8927
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 66.8241
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 57.0963
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 56.5571
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 52.1284
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 37.4649
8 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 35.4408
9 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 32.0857
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.3136

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1061
58502 ENSG00000285730 novel transcript -0.1061
58501 ENSG00000285729 novel transcript -0.1061
58500 ENSG00000285728 novel transcript, antisense to PPIH -0.1061
58499 ENSG00000285727 novel transcript -0.1061
58498 ENSG00000285726 novel transcript -0.1061
58497 ENSG00000285725 novel transcript -0.1061
58496 ENSG00000285724 novel transcript -0.1061
58495 ENSG00000285723 novel protein -0.1061
58494 ENSG00000285722 novel transcript -0.1061

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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