Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM967514

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T7Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 80.7495
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 72.9726
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 67.9294
4 ENSG00000075624 ACTB actin beta 62.7137
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 58.6204
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 52.0856
7 ENSG00000087086 FTL ferritin light chain 50.5339
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 49.8603
9 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 38.4230
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 35.7132

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285728 novel transcript, antisense to PPIH -0.1105
58502 ENSG00000285727 novel transcript -0.1105
58501 ENSG00000285726 novel transcript -0.1105
58500 ENSG00000285725 novel transcript -0.1105
58499 ENSG00000285724 novel transcript -0.1105
58498 ENSG00000285723 novel protein -0.1105
58497 ENSG00000285722 novel transcript -0.1105
58496 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.1105
58495 ENSG00000285719 novel transcript, antisense to CD34 -0.1105
58494 ENSG00000285718 novel transcript -0.1105

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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